edu.stanford.smi.protegex.owl.jena.creator
Class JenaCreator

java.lang.Object
  edu.stanford.smi.protegex.owl.jena.creator.JenaCreator

public class JenaCreator

extends Object

A class that creates a Jena OntModel from a Protege OWL model. The resulting OntModel can then be used in Jena services such as for reasoning.

Author:

Holger Knublauch

Field Summary

private Map	anonMap
private int	classCount
private int	classProgressCount
private boolean	forReasoning
private boolean	inferred
private boolean	logging
static String	LOGGING_PROPERTY
private com.hp.hpl.jena.ontology.OntModel	ontModel
private com.hp.hpl.jena.rdf.model.Model	owlFullModel
private OWLModel	owlModel
private ProgressDisplay	progressDisplay
private Set	systemOwnSlots
private Collection	targetClses The classes that shall be processed in this creation process.
private Map	todoIndividualsWithObjectProperties A Map from RDFIndividuals to Lists of RDFProperties to indicate which (object) property values still need to be assigned outside of the usual loop.

Constructor Summary

JenaCreator(OWLModel owlModel, boolean forReasoning, boolean inferred, Collection targetClses, ProgressDisplay progressDisplay)

JenaCreator(OWLModel owlModel, boolean forReasoning, Collection targetClses, ProgressDisplay progressDisplay)

JenaCreator(OWLModel owlModel, Collection targetClses, ProgressDisplay progressDisplay)

Method Summary

private void	addDisjointClasses(OWLNamedClass namedCls, com.hp.hpl.jena.ontology.OntClass ontClass)
private void	addEquivalentClasses(OWLNamedClass namedCls, com.hp.hpl.jena.ontology.OntClass ontClass)
private void	addEquivalentProperties(OWLProperty property, com.hp.hpl.jena.ontology.OntProperty ontProperty)
private void	addImports(OWLOntology oi, com.hp.hpl.jena.ontology.Ontology ontology)
private void	addPropertyValues(RDFResource rdfResource, com.hp.hpl.jena.ontology.OntResource ontResource)
private void	addPropertyValues(RDFResource instance, com.hp.hpl.jena.ontology.OntResource ontResource, RDFProperty rdfProperty)
private void	addPropertyValues2(RDFResource rdfResource, com.hp.hpl.jena.ontology.OntResource ontResource)
private void	addSuperclasses(RDFSNamedClass rdfsClass, com.hp.hpl.jena.ontology.OntClass ontClass)
private void	addSuperproperties(RDFProperty property, com.hp.hpl.jena.ontology.OntProperty ontProperty)
private void	addTodoPropertyValues()
private void	adjustOntPropertyRDFType(RDFProperty property, com.hp.hpl.jena.ontology.OntProperty ontProperty)
private void	createAdditionalAnonymousSuperclassesOfIncludedClass(OWLNamedClass namedCls)
private void	createAllDifferents()
private com.hp.hpl.jena.ontology.OntClass	createAnonymousClass(OWLAnonymousClass anonymousCls)
private com.hp.hpl.jena.ontology.Restriction	createCardinalityRestriction(OWLCardinalityBase restriction)
static com.hp.hpl.jena.ontology.DataRange	createDataRange(OWLDataRange dataRange, com.hp.hpl.jena.ontology.OntModel ontModel)
private com.hp.hpl.jena.ontology.OntProperty	createDatatypeProperty(OWLDatatypeProperty datatypeProperty)
private com.hp.hpl.jena.ontology.EnumeratedClass	createEnumeratedClass(OWLEnumeratedClass enumerationCls)
private com.hp.hpl.jena.ontology.HasValueRestriction	createHasValueRestriction(OWLHasValue hasRestriction)
private com.hp.hpl.jena.ontology.Individual	createIndividual(RDFResource rdfResource, boolean anon)
private void	createIndividuals()
private static com.hp.hpl.jena.rdf.model.Literal	createLiteral(Object value, com.hp.hpl.jena.ontology.OntModel ontModel)
private com.hp.hpl.jena.ontology.OntClass	createLogicalClass(OWLLogicalClass logicalCls)
private com.hp.hpl.jena.ontology.OntClass	createNamedClass(RDFSNamedClass rdfsClass)
private com.hp.hpl.jena.ontology.OntProperty	createObjectProperty(OWLObjectProperty objectProperty)
private void	createOntClasses()
com.hp.hpl.jena.ontology.OntModel	createOntModel()
com.hp.hpl.jena.ontology.OntModel	createOntModelWithoutOWLFullModel()
private void	createOntologies()
private void	createOntProperties()
(package private) com.hp.hpl.jena.ontology.OntProperty	createOntProperty(RDFProperty property)
private com.hp.hpl.jena.rdf.model.RDFList	createOntResourceList(Collection instances)
private void	createPrefixes(com.hp.hpl.jena.ontology.OntModel ontModel)
private com.hp.hpl.jena.ontology.Restriction	createQuantifierRestriction(OWLQuantifierRestriction restriction)
private com.hp.hpl.jena.ontology.OntProperty	createRDFProperty(RDFProperty rdfProperty)
private com.hp.hpl.jena.ontology.Restriction	createRestriction(OWLRestriction restriction)
private void	ensureProtegeMetaOntologyImported()
private com.hp.hpl.jena.ontology.Ontology	getDefaultOntology()
private com.hp.hpl.jena.ontology.Individual	getIndividual(RDFResource rdfResource)
private com.hp.hpl.jena.ontology.OntClass	getOntClass(RDFSClass rdfsClass)
com.hp.hpl.jena.ontology.OntModel	getOntModel()
private com.hp.hpl.jena.ontology.OntProperty	getOntProperty(RDFProperty property)
private com.hp.hpl.jena.ontology.OntResource	getOntResource(RDFResource rdfResource)
com.hp.hpl.jena.rdf.model.Model	getOWLFullModel()
private com.hp.hpl.jena.rdf.model.Property	getProperty(RDFProperty property)
private Iterator	getRDFSClassIterator()
private com.hp.hpl.jena.rdf.model.Resource	getResource(RDFResource rdfResource)
private boolean	isSystemOwnSlot(edu.stanford.smi.protege.model.Instance instance, edu.stanford.smi.protege.model.Slot slot)
private void	log(String msg)
void	run(com.hp.hpl.jena.ontology.OntModel ontModel, com.hp.hpl.jena.rdf.model.Model owlFullModel)
private void	setPropertyDomain(RDFProperty property, com.hp.hpl.jena.ontology.OntProperty ontProperty)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

anonMap

private Map anonMap

classCount

private int classCount

classProgressCount

private int classProgressCount

forReasoning

private boolean forReasoning

inferred

private boolean inferred

logging

private boolean logging

owlModel

private OWLModel owlModel

ontModel

private com.hp.hpl.jena.ontology.OntModel ontModel

owlFullModel

private com.hp.hpl.jena.rdf.model.Model owlFullModel

progressDisplay

private ProgressDisplay progressDisplay

systemOwnSlots

private Set systemOwnSlots

targetClses

private Collection targetClses

The classes that shall be processed in this creation process.

todoIndividualsWithObjectProperties

private Map todoIndividualsWithObjectProperties

A Map from RDFIndividuals to Lists of RDFProperties to indicate which (object) property values still need to be assigned outside of the usual loop.

LOGGING_PROPERTY

public static final String LOGGING_PROPERTY

Constructor Detail

JenaCreator

public JenaCreator(OWLModel owlModel,
                   Collection targetClses,
                   ProgressDisplay progressDisplay)

JenaCreator

public JenaCreator(OWLModel owlModel,
                   boolean forReasoning,
                   Collection targetClses,
                   ProgressDisplay progressDisplay)

JenaCreator

public JenaCreator(OWLModel owlModel,
                   boolean forReasoning,
                   boolean inferred,
                   Collection targetClses,
                   ProgressDisplay progressDisplay)

Method Detail

addDisjointClasses

private void addDisjointClasses(OWLNamedClass namedCls,
                                com.hp.hpl.jena.ontology.OntClass ontClass)

addEquivalentClasses

private void addEquivalentClasses(OWLNamedClass namedCls,
                                  com.hp.hpl.jena.ontology.OntClass ontClass)

addEquivalentProperties

private void addEquivalentProperties(OWLProperty property,
                                     com.hp.hpl.jena.ontology.OntProperty ontProperty)

addImports

private void addImports(OWLOntology oi,
                        com.hp.hpl.jena.ontology.Ontology ontology)

addPropertyValues

private void addPropertyValues(RDFResource rdfResource,
                               com.hp.hpl.jena.ontology.OntResource ontResource)

addPropertyValues2

private void addPropertyValues2(RDFResource rdfResource,
                                com.hp.hpl.jena.ontology.OntResource ontResource)

addPropertyValues

private void addPropertyValues(RDFResource instance,
                               com.hp.hpl.jena.ontology.OntResource ontResource,
                               RDFProperty rdfProperty)

addSuperclasses

private void addSuperclasses(RDFSNamedClass rdfsClass,
                             com.hp.hpl.jena.ontology.OntClass ontClass)

addSuperproperties

private void addSuperproperties(RDFProperty property,
                                com.hp.hpl.jena.ontology.OntProperty ontProperty)

addTodoPropertyValues

private void addTodoPropertyValues()

createAdditionalAnonymousSuperclassesOfIncludedClass

private void createAdditionalAnonymousSuperclassesOfIncludedClass(OWLNamedClass namedCls)

createAnonymousClass

private com.hp.hpl.jena.ontology.OntClass createAnonymousClass(OWLAnonymousClass anonymousCls)

createCardinalityRestriction

private com.hp.hpl.jena.ontology.Restriction createCardinalityRestriction(OWLCardinalityBase restriction)

createDataRange

public static com.hp.hpl.jena.ontology.DataRange createDataRange(OWLDataRange dataRange,
                                                                 com.hp.hpl.jena.ontology.OntModel ontModel)

createLiteral

private static com.hp.hpl.jena.rdf.model.Literal createLiteral(Object value,
                                                               com.hp.hpl.jena.ontology.OntModel ontModel)

createDatatypeProperty

private com.hp.hpl.jena.ontology.OntProperty createDatatypeProperty(OWLDatatypeProperty datatypeProperty)

createEnumeratedClass

private com.hp.hpl.jena.ontology.EnumeratedClass createEnumeratedClass(OWLEnumeratedClass enumerationCls)

createHasValueRestriction

private com.hp.hpl.jena.ontology.HasValueRestriction createHasValueRestriction(OWLHasValue hasRestriction)

createIndividual

private com.hp.hpl.jena.ontology.Individual createIndividual(RDFResource rdfResource,
                                                             boolean anon)

createIndividuals

private void createIndividuals()

createLogicalClass

private com.hp.hpl.jena.ontology.OntClass createLogicalClass(OWLLogicalClass logicalCls)

createNamedClass

private com.hp.hpl.jena.ontology.OntClass createNamedClass(RDFSNamedClass rdfsClass)

createObjectProperty

private com.hp.hpl.jena.ontology.OntProperty createObjectProperty(OWLObjectProperty objectProperty)

createOntClasses

private void createOntClasses()

createOntModel

public com.hp.hpl.jena.ontology.OntModel createOntModel()

createOntModelWithoutOWLFullModel

public com.hp.hpl.jena.ontology.OntModel createOntModelWithoutOWLFullModel()

createOntologies

private void createOntologies()

createOntProperty

com.hp.hpl.jena.ontology.OntProperty createOntProperty(RDFProperty property)

adjustOntPropertyRDFType

private void adjustOntPropertyRDFType(RDFProperty property,
                                      com.hp.hpl.jena.ontology.OntProperty ontProperty)

createOntProperties

private void createOntProperties()

createOntResourceList

private com.hp.hpl.jena.rdf.model.RDFList createOntResourceList(Collection instances)

createPrefixes

private void createPrefixes(com.hp.hpl.jena.ontology.OntModel ontModel)

createQuantifierRestriction

private com.hp.hpl.jena.ontology.Restriction createQuantifierRestriction(OWLQuantifierRestriction restriction)

createRDFProperty

private com.hp.hpl.jena.ontology.OntProperty createRDFProperty(RDFProperty rdfProperty)

createRestriction

private com.hp.hpl.jena.ontology.Restriction createRestriction(OWLRestriction restriction)

ensureProtegeMetaOntologyImported

private void ensureProtegeMetaOntologyImported()

getDefaultOntology

private com.hp.hpl.jena.ontology.Ontology getDefaultOntology()

getIndividual

private com.hp.hpl.jena.ontology.Individual getIndividual(RDFResource rdfResource)

getRDFSClassIterator

private Iterator getRDFSClassIterator()

getOntClass

private com.hp.hpl.jena.ontology.OntClass getOntClass(RDFSClass rdfsClass)

getOntModel

public com.hp.hpl.jena.ontology.OntModel getOntModel()

getOntProperty

private com.hp.hpl.jena.ontology.OntProperty getOntProperty(RDFProperty property)

getOntResource

private com.hp.hpl.jena.ontology.OntResource getOntResource(RDFResource rdfResource)

getOWLFullModel

public com.hp.hpl.jena.rdf.model.Model getOWLFullModel()

getProperty

private com.hp.hpl.jena.rdf.model.Property getProperty(RDFProperty property)

getResource

private com.hp.hpl.jena.rdf.model.Resource getResource(RDFResource rdfResource)

isSystemOwnSlot

private boolean isSystemOwnSlot(edu.stanford.smi.protege.model.Instance instance,
                                edu.stanford.smi.protege.model.Slot slot)

log

private void log(String msg)

run

public void run(com.hp.hpl.jena.ontology.OntModel ontModel,
                com.hp.hpl.jena.rdf.model.Model owlFullModel)

createAllDifferents

private void createAllDifferents()

setPropertyDomain

private void setPropertyDomain(RDFProperty property,
                               com.hp.hpl.jena.ontology.OntProperty ontProperty)